data_2JX
# 
_chem_comp.id                                    2JX 
_chem_comp.name                                  "5-[(2R)-2,3-dihydro-1,4-benzodioxin-2-yl]-2,4-dihydro-3H-1,2,4-triazole-3-thione" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C10 H9 N3 O2 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2013-11-13 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        235.262 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     2JX 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4NI1 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
2JX C2  C2  C 0 1 N N N N N N 34.471 26.633 48.824 -3.490 0.154  0.026  C2  2JX 1  
2JX N3  N3  N 0 1 N N N N N N 33.776 26.329 49.970 -2.318 0.439  -0.575 N3  2JX 2  
2JX S1  S1  S 0 1 N N N N N N 33.379 27.248 47.569 -4.986 0.943  -0.243 S1  2JX 3  
2JX C4  C4  C 0 1 N N N N N N 34.806 25.888 50.759 -1.364 -0.422 -0.091 C4  2JX 4  
2JX N5  N5  N 0 1 N N N N N N 35.970 25.883 50.273 -1.914 -1.210 0.776  N5  2JX 5  
2JX N6  N6  N 0 1 N N N N N N 35.724 26.407 48.920 -3.270 -0.871 0.875  N6  2JX 6  
2JX C7  C7  C 0 1 N N R N N N 34.439 25.426 52.181 0.086  -0.444 -0.501 C7  2JX 7  
2JX C8  C8  C 0 1 N N N N N N 33.099 25.457 52.632 0.735  -1.755 -0.037 C8  2JX 8  
2JX O9  O9  O 0 1 N N N N N N 32.741 26.221 53.838 2.112  -1.738 -0.430 O9  2JX 9  
2JX C10 C10 C 0 1 Y N N N N N 33.739 26.071 54.900 2.805  -0.594 -0.180 C10 2JX 10 
2JX C11 C11 C 0 1 Y N N N N N 35.108 26.151 54.529 2.141  0.596  0.091  C11 2JX 11 
2JX O12 O12 O 0 1 N N N N N N 35.374 26.375 53.146 0.781  0.643  0.119  O12 2JX 12 
2JX C13 C13 C 0 1 Y N N N N N 36.080 26.019 55.454 2.867  1.751  0.339  C13 2JX 13 
2JX C14 C14 C 0 1 Y N N N N N 35.769 25.799 56.865 4.249  1.717  0.319  C14 2JX 14 
2JX C15 C15 C 0 1 Y N N N N N 34.379 25.705 57.278 4.910  0.533  0.052  C15 2JX 15 
2JX C16 C16 C 0 1 Y N N N N N 33.347 25.842 56.281 4.192  -0.621 -0.197 C16 2JX 16 
2JX H1  H1  H 0 1 N N N N N N 32.799 26.407 50.170 -2.173 1.133  -1.238 H1  2JX 17 
2JX H2  H2  H 0 1 N N N N N N 36.410 26.558 48.208 -3.928 -1.295 1.448  H2  2JX 18 
2JX H3  H3  H 0 1 N N N N N N 34.825 24.403 52.298 0.163  -0.360 -1.585 H3  2JX 19 
2JX H4  H4  H 0 1 N N N N N N 32.497 25.867 51.808 0.664  -1.837 1.048  H4  2JX 20 
2JX H5  H5  H 0 1 N N N N N N 32.804 24.414 52.819 0.230  -2.601 -0.504 H5  2JX 21 
2JX H6  H6  H 0 1 N N N N N N 37.113 26.077 55.145 2.353  2.677  0.548  H6  2JX 22 
2JX H7  H7  H 0 1 N N N N N N 36.563 25.707 57.592 4.813  2.618  0.513  H7  2JX 23 
2JX H8  H8  H 0 1 N N N N N N 34.124 25.535 58.314 5.990  0.510  0.037  H8  2JX 24 
2JX H9  H9  H 0 1 N N N N N N 32.304 25.776 56.554 4.711  -1.545 -0.405 H9  2JX 25 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
2JX S1  C2  DOUB N N 1  
2JX C2  N6  SING N N 2  
2JX C2  N3  SING N N 3  
2JX N6  N5  SING N N 4  
2JX N3  C4  SING N N 5  
2JX N5  C4  DOUB N N 6  
2JX C4  C7  SING N N 7  
2JX C7  C8  SING N N 8  
2JX C7  O12 SING N N 9  
2JX C8  O9  SING N N 10 
2JX O12 C11 SING N N 11 
2JX O9  C10 SING N N 12 
2JX C11 C10 SING Y N 13 
2JX C11 C13 DOUB Y N 14 
2JX C10 C16 DOUB Y N 15 
2JX C13 C14 SING Y N 16 
2JX C16 C15 SING Y N 17 
2JX C14 C15 DOUB Y N 18 
2JX N3  H1  SING N N 19 
2JX N6  H2  SING N N 20 
2JX C7  H3  SING N N 21 
2JX C8  H4  SING N N 22 
2JX C8  H5  SING N N 23 
2JX C13 H6  SING N N 24 
2JX C14 H7  SING N N 25 
2JX C15 H8  SING N N 26 
2JX C16 H9  SING N N 27 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
2JX SMILES           ACDLabs              12.01 "S=C1NN=C(N1)C2Oc3ccccc3OC2"                                                                                
2JX InChI            InChI                1.03  "InChI=1S/C10H9N3O2S/c16-10-11-9(12-13-10)8-5-14-6-3-1-2-4-7(6)15-8/h1-4,8H,5H2,(H2,11,12,13,16)/t8-/m0/s1" 
2JX InChIKey         InChI                1.03  WDUGNJIRKJHDNF-QMMMGPOBSA-N                                                                                 
2JX SMILES_CANONICAL CACTVS               3.385 "S=C1NN=C(N1)[C@@H]2COc3ccccc3O2"                                                                           
2JX SMILES           CACTVS               3.385 "S=C1NN=C(N1)[CH]2COc3ccccc3O2"                                                                             
2JX SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1ccc2c(c1)OC[C@H](O2)C3=NNC(=S)N3"                                                                        
2JX SMILES           "OpenEye OEToolkits" 1.7.6 "c1ccc2c(c1)OCC(O2)C3=NNC(=S)N3"                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
2JX "SYSTEMATIC NAME" ACDLabs              12.01 "5-[(2R)-2,3-dihydro-1,4-benzodioxin-2-yl]-2,4-dihydro-3H-1,2,4-triazole-3-thione" 
2JX "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "3-[(3R)-2,3-dihydro-1,4-benzodioxin-3-yl]-1,4-dihydro-1,2,4-triazole-5-thione"    
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
2JX "Create component" 2013-11-13 RCSB 
2JX "Initial release"  2014-09-17 RCSB 
2JX "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            2JX 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               S1 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
