data_A2X
# 
_chem_comp.id                                    A2X 
_chem_comp.name                                  "2-(4,6-dimethylpyrimidin-2-yl)sulfanyl-N-(4-phenylsulfanylphenyl)ethanamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H19 N3 O S2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-11-15 
_chem_comp.pdbx_modified_date                    2018-10-12 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        381.514 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A2X 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5YQM 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A2X C01  C1  C 0 1 Y N N -13.854 -12.470 -20.514 7.656  2.076  -0.488 C01  A2X 1  
A2X C02  C2  C 0 1 Y N N -13.248 -12.960 -21.656 6.672  2.822  -1.110 C02  A2X 2  
A2X C03  C3  C 0 1 Y N N -13.769 -12.651 -22.900 5.381  2.333  -1.200 C03  A2X 3  
A2X C04  C4  C 0 1 Y N N -14.884 -11.843 -22.999 5.071  1.097  -0.668 C04  A2X 4  
A2X C05  C5  C 0 1 Y N N -15.496 -11.358 -21.861 6.057  0.345  -0.041 C05  A2X 5  
A2X C06  C6  C 0 1 Y N N -14.980 -11.670 -20.608 7.354  0.837  0.042  C06  A2X 6  
A2X S07  S1  S 0 1 N N N -16.971 -10.306 -21.998 5.666  -1.232 0.641  S07  A2X 7  
A2X C08  C7  C 0 1 Y N N -16.848 -9.173  -20.597 3.921  -1.338 0.418  C08  A2X 8  
A2X C09  C8  C 0 1 Y N N -16.225 -7.954  -20.772 3.401  -1.985 -0.696 C09  A2X 9  
A2X C10  C9  C 0 1 Y N N -16.112 -7.082  -19.708 2.034  -2.068 -0.871 C10  A2X 10 
A2X C11  C10 C 0 1 Y N N -16.616 -7.438  -18.467 1.179  -1.505 0.068  C11  A2X 11 
A2X C12  C11 C 0 1 Y N N -17.233 -8.668  -18.288 1.699  -0.858 1.181  C12  A2X 12 
A2X C13  C12 C 0 1 Y N N -17.352 -9.540  -19.361 3.065  -0.780 1.359  C13  A2X 13 
A2X N14  N1  N 0 1 N N N -16.444 -6.448  -17.421 -0.208 -1.588 -0.110 N14  A2X 14 
A2X C15  C13 C 0 1 N N N -16.855 -6.614  -16.035 -1.000 -0.570 0.280  C15  A2X 15 
A2X O16  O1  O 0 1 N N N -17.380 -7.606  -15.651 -0.522 0.383  0.859  O16  A2X 16 
A2X C17  C14 C 0 1 N N N -16.581 -5.456  -15.068 -2.479 -0.614 -0.005 C17  A2X 17 
A2X S18  S2  S 0 1 N N N -14.799 -5.344  -14.676 -3.262 0.887  0.637  S18  A2X 18 
A2X C19  C15 C 0 1 Y N N -13.988 -4.325  -15.945 -4.936 0.578  0.180  C19  A2X 19 
A2X N20  N2  N 0 1 Y N N -12.819 -3.782  -15.664 -5.865 1.474  0.482  N20  A2X 20 
A2X C21  C16 C 0 1 Y N N -12.194 -3.025  -16.544 -7.130 1.273  0.153  C21  A2X 21 
A2X C22  C17 C 0 1 Y N N -12.804 -2.821  -17.773 -7.479 0.109  -0.514 C22  A2X 22 
A2X C23  C18 C 0 1 Y N N -14.035 -3.404  -18.030 -6.482 -0.807 -0.814 C23  A2X 23 
A2X N24  N3  N 0 1 Y N N -14.610 -4.150  -17.100 -5.235 -0.543 -0.462 N24  A2X 24 
A2X C25  C19 C 0 1 N N N -14.723 -3.188  -19.380 -6.815 -2.086 -1.538 C25  A2X 25 
A2X C26  C20 C 0 1 N N N -10.840 -2.403  -16.213 -8.180 2.297  0.500  C26  A2X 26 
A2X H011 H1  H 0 0 N N N -13.447 -12.713 -19.544 8.662  2.462  -0.419 H011 A2X 27 
A2X H021 H2  H 0 0 N N N -12.369 -13.583 -21.577 6.911  3.789  -1.528 H021 A2X 28 
A2X H031 H3  H 0 0 N N N -13.304 -13.042 -23.793 4.615  2.918  -1.688 H031 A2X 29 
A2X H041 H4  H 0 0 N N N -15.279 -11.589 -23.972 4.063  0.716  -0.737 H041 A2X 30 
A2X H061 H5  H 0 0 N N N -15.454 -11.291 -19.715 8.123  0.256  0.528  H061 A2X 31 
A2X H091 H6  H 0 0 N N N -15.827 -7.683  -21.739 4.066  -2.423 -1.426 H091 A2X 32 
A2X H101 H7  H 0 0 N N N -15.632 -6.124  -19.842 1.630  -2.571 -1.737 H101 A2X 33 
A2X H121 H8  H 0 0 N N N -17.619 -8.945  -17.318 1.033  -0.420 1.911  H121 A2X 34 
A2X H131 H9  H 0 0 N N N -17.834 -10.498 -19.233 3.469  -0.281 2.228  H131 A2X 35 
A2X H141 H10 H 0 0 N N N -16.009 -5.583  -17.672 -0.599 -2.379 -0.513 H141 A2X 36 
A2X H171 H11 H 0 0 N N N -16.908 -4.514  -15.532 -2.641 -0.676 -1.081 H171 A2X 37 
A2X H172 H12 H 0 0 N N N -17.145 -5.622  -14.138 -2.917 -1.487 0.479  H172 A2X 38 
A2X H221 H13 H 0 0 N N N -12.323 -2.212  -18.524 -8.505 -0.080 -0.794 H221 A2X 39 
A2X H252 H14 H 0 0 N N N -15.682 -3.727  -19.394 -6.736 -1.926 -2.613 H252 A2X 40 
A2X H253 H15 H 0 0 N N N -14.905 -2.114  -19.531 -6.118 -2.867 -1.235 H253 A2X 41 
A2X H251 H16 H 0 0 N N N -14.077 -3.567  -20.185 -7.832 -2.390 -1.290 H251 A2X 42 
A2X H262 H17 H 0 0 N N N -10.541 -2.695  -15.196 -8.274 3.012  -0.317 H262 A2X 43 
A2X H263 H18 H 0 0 N N N -10.088 -2.758  -16.933 -9.136 1.798  0.657  H263 A2X 44 
A2X H261 H19 H 0 0 N N N -10.916 -1.307  -16.272 -7.890 2.821  1.411  H261 A2X 45 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A2X C04 C03  DOUB Y N 1  
A2X C04 C05  SING Y N 2  
A2X C03 C02  SING Y N 3  
A2X S07 C05  SING N N 4  
A2X S07 C08  SING N N 5  
A2X C05 C06  DOUB Y N 6  
A2X C02 C01  DOUB Y N 7  
A2X C09 C08  DOUB Y N 8  
A2X C09 C10  SING Y N 9  
A2X C06 C01  SING Y N 10 
A2X C08 C13  SING Y N 11 
A2X C10 C11  DOUB Y N 12 
A2X C25 C23  SING N N 13 
A2X C13 C12  DOUB Y N 14 
A2X C11 C12  SING Y N 15 
A2X C11 N14  SING N N 16 
A2X C23 C22  DOUB Y N 17 
A2X C23 N24  SING Y N 18 
A2X C22 C21  SING Y N 19 
A2X N14 C15  SING N N 20 
A2X N24 C19  DOUB Y N 21 
A2X C21 C26  SING N N 22 
A2X C21 N20  DOUB Y N 23 
A2X C15 O16  DOUB N N 24 
A2X C15 C17  SING N N 25 
A2X C19 N20  SING Y N 26 
A2X C19 S18  SING N N 27 
A2X C17 S18  SING N N 28 
A2X C01 H011 SING N N 29 
A2X C02 H021 SING N N 30 
A2X C03 H031 SING N N 31 
A2X C04 H041 SING N N 32 
A2X C06 H061 SING N N 33 
A2X C09 H091 SING N N 34 
A2X C10 H101 SING N N 35 
A2X C12 H121 SING N N 36 
A2X C13 H131 SING N N 37 
A2X N14 H141 SING N N 38 
A2X C17 H171 SING N N 39 
A2X C17 H172 SING N N 40 
A2X C22 H221 SING N N 41 
A2X C25 H252 SING N N 42 
A2X C25 H253 SING N N 43 
A2X C25 H251 SING N N 44 
A2X C26 H262 SING N N 45 
A2X C26 H263 SING N N 46 
A2X C26 H261 SING N N 47 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A2X InChI            InChI                1.03  "InChI=1S/C20H19N3OS2/c1-14-12-15(2)22-20(21-14)25-13-19(24)23-16-8-10-18(11-9-16)26-17-6-4-3-5-7-17/h3-12H,13H2,1-2H3,(H,23,24)" 
A2X InChIKey         InChI                1.03  KOUOSAPHOUALKH-UHFFFAOYSA-N                                                                                                       
A2X SMILES_CANONICAL CACTVS               3.385 "Cc1cc(C)nc(SCC(=O)Nc2ccc(Sc3ccccc3)cc2)n1"                                                                                       
A2X SMILES           CACTVS               3.385 "Cc1cc(C)nc(SCC(=O)Nc2ccc(Sc3ccccc3)cc2)n1"                                                                                       
A2X SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "Cc1cc(nc(n1)SCC(=O)Nc2ccc(cc2)Sc3ccccc3)C"                                                                                       
A2X SMILES           "OpenEye OEToolkits" 2.0.6 "Cc1cc(nc(n1)SCC(=O)Nc2ccc(cc2)Sc3ccccc3)C"                                                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
A2X "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "2-(4,6-dimethylpyrimidin-2-yl)sulfanyl-~{N}-(4-phenylsulfanylphenyl)ethanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A2X "Create component" 2017-11-15 RCSB 
A2X "Initial release"  2018-10-17 RCSB 
# 
