data_5SY
# 
_chem_comp.id                                    5SY 
_chem_comp.name                                  "[(2~{S},3~{R},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-2-methoxy-5-oxidanyl-4-[(2-oxidanylidenechromen-3-yl)methoxy]oxan-3-yl] ethanoate" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H22 O9" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-11-25 
_chem_comp.pdbx_modified_date                    2016-09-30 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        394.373 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     5SY 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5EXO 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
5SY C4  C1  C 0 1 N N S 18.444 -6.845  -0.547 -1.954 1.517  -0.522 C4  5SY 1  
5SY C5  C2  C 0 1 N N R 19.929 -6.617  -0.733 -3.474 1.586  -0.357 C5  5SY 2  
5SY C6  C3  C 0 1 N N N 20.428 -5.496  0.175  -4.030 2.718  -1.222 C6  5SY 3  
5SY O6  O1  O 0 1 N N N 21.818 -5.290  -0.006 -5.432 2.858  -0.980 O6  5SY 4  
5SY O5  O2  O 0 1 N N N 20.687 -7.805  -0.366 -4.053 0.345  -0.767 O5  5SY 5  
5SY O4  O3  O 0 1 N N N 18.116 -7.092  0.832  -1.631 1.324  -1.901 O4  5SY 6  
5SY C3  C4  C 0 1 N N S 18.050 -8.040  -1.408 -1.410 0.344  0.299  C3  5SY 7  
5SY C2  C5  C 0 1 N N R 18.897 -9.228  -1.060 -2.101 -0.946 -0.153 C2  5SY 8  
5SY C1  C6  C 0 1 N N S 20.368 -8.957  -1.133 -3.619 -0.782 -0.003 C1  5SY 9  
5SY O1  O4  O 0 1 N N N 20.677 -8.635  -2.506 -3.942 -0.576 1.373  O1  5SY 10 
5SY C   C7  C 0 1 N N N 22.012 -8.157  -2.673 -5.341 -0.636 1.657  C   5SY 11 
5SY O2  O5  O 0 1 N N N 18.547 -10.272 -2.027 -1.647 -2.054 0.668  O2  5SY 12 
5SY CAC C8  C 0 1 N N N 18.070 -11.518 -1.451 -1.622 -3.267 0.094  CAC 5SY 13 
5SY OAC O6  O 0 1 N N N 17.323 -11.519 -0.202 -1.969 -3.399 -1.056 OAC 5SY 14 
5SY CAM C9  C 0 1 N N N 18.211 -12.827 -1.948 -1.161 -4.465 0.884  CAM 5SY 15 
5SY O3  O7  O 0 1 N N N 16.725 -8.426  -1.143 -0.001 0.228  0.093  O3  5SY 16 
5SY CA  C10 C 0 1 N N N 15.757 -7.777  -1.918 0.786  0.977  1.022  CA  5SY 17 
5SY CB  C11 C 0 1 N N N 14.452 -8.540  -1.824 2.248  0.783  0.713  CB  5SY 18 
5SY CC  C12 C 0 1 N N N 14.305 -9.704  -1.161 2.626  -0.010 -0.321 CC  5SY 19 
5SY CD  C13 C 0 1 Y N N 13.015 -10.357 -1.120 4.059  -0.169 -0.585 CD  5SY 20 
5SY CG  C14 C 0 1 Y N N 12.853 -11.557 -0.432 4.515  -0.972 -1.634 CG  5SY 21 
5SY CH  C15 C 0 1 Y N N 11.598 -12.185 -0.400 5.858  -1.101 -1.855 CH  5SY 22 
5SY CI  C16 C 0 1 Y N N 10.509 -11.593 -1.058 6.771  -0.441 -1.045 CI  5SY 23 
5SY CJ  C17 C 0 1 Y N N 10.673 -10.376 -1.752 6.341  0.356  -0.004 CJ  5SY 24 
5SY CE  C18 C 0 1 Y N N 11.938 -9.764  -1.776 4.982  0.502  0.238  CE  5SY 25 
5SY OA  O8  O 0 1 N N N 12.124 -8.566  -2.448 4.540  1.277  1.251  OA  5SY 26 
5SY CF  C19 C 0 1 N N N 13.345 -7.950  -2.488 3.229  1.431  1.495  CF  5SY 27 
5SY OB  O9  O 0 1 N N N 13.566 -6.827  -3.111 2.877  2.140  2.420  OB  5SY 28 
5SY H1  H1  H 0 1 N N N 17.901 -5.958  -0.906 -1.507 2.446  -0.170 H1  5SY 29 
5SY H2  H2  H 0 1 N N N 20.128 -6.349  -1.781 -3.718 1.773  0.688  H2  5SY 30 
5SY H3  H3  H 0 1 N N N 19.890 -4.568  -0.068 -3.523 3.650  -0.970 H3  5SY 31 
5SY H4  H4  H 0 1 N N N 20.236 -5.767  1.224  -3.865 2.487  -2.274 H4  5SY 32 
5SY H5  H5  H 0 1 N N N 22.112 -4.590  0.565  -5.852 3.560  -1.496 H5  5SY 33 
5SY H6  H6  H 0 1 N N N 18.366 -6.341  1.357  -1.947 2.030  -2.481 H6  5SY 34 
5SY H7  H7  H 0 1 N N N 18.184 -7.786  -2.470 -1.612 0.514  1.357  H7  5SY 35 
5SY H8  H8  H 0 1 N N N 18.643 -9.566  -0.045 -1.858 -1.143 -1.197 H8  5SY 36 
5SY H9  H9  H 0 1 N N N 20.936 -9.836  -0.795 -4.119 -1.681 -0.364 H9  5SY 37 
5SY H10 H10 H 0 1 N N N 22.190 -7.929  -3.734 -5.503 -0.470 2.722  H10 5SY 38 
5SY H11 H11 H 0 1 N N N 22.153 -7.246  -2.073 -5.861 0.133  1.086  H11 5SY 39 
5SY H12 H12 H 0 1 N N N 22.722 -8.928  -2.340 -5.727 -1.617 1.380  H12 5SY 40 
5SY H13 H13 H 0 1 N N N 17.718 -13.534 -1.265 -2.016 -4.920 1.385  H13 5SY 41 
5SY H14 H14 H 0 1 N N N 17.746 -12.894 -2.943 -0.706 -5.191 0.211  H14 5SY 42 
5SY H15 H15 H 0 1 N N N 19.280 -13.077 -2.025 -0.430 -4.150 1.628  H15 5SY 43 
5SY H16 H16 H 0 1 N N N 16.088 -7.741  -2.966 0.535  2.035  0.941  H16 5SY 44 
5SY H17 H17 H 0 1 N N N 15.612 -6.753  -1.544 0.580  0.631  2.035  H17 5SY 45 
5SY H18 H18 H 0 1 N N N 15.151 -10.150 -0.660 1.890  -0.512 -0.933 H18 5SY 46 
5SY H19 H19 H 0 1 N N N 13.694 -12.005 0.077  3.809  -1.489 -2.267 H19 5SY 47 
5SY H20 H20 H 0 1 N N N 11.471 -13.119 0.128  6.211  -1.721 -2.665 H20 5SY 48 
5SY H21 H21 H 0 1 N N N 9.541  -12.071 -1.033 7.829  -0.553 -1.231 H21 5SY 49 
5SY H22 H22 H 0 1 N N N 9.836  -9.920  -2.259 7.060  0.865  0.621  H22 5SY 50 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
5SY OB  CF  DOUB N N 1  
5SY C   O1  SING N N 2  
5SY O1  C1  SING N N 3  
5SY CF  OA  SING N N 4  
5SY CF  CB  SING N N 5  
5SY OA  CE  SING N N 6  
5SY O2  CAC SING N N 7  
5SY O2  C2  SING N N 8  
5SY CAM CAC SING N N 9  
5SY CA  CB  SING N N 10 
5SY CA  O3  SING N N 11 
5SY CB  CC  DOUB N N 12 
5SY CE  CJ  DOUB Y N 13 
5SY CE  CD  SING Y N 14 
5SY CJ  CI  SING Y N 15 
5SY CAC OAC DOUB N N 16 
5SY C3  O3  SING N N 17 
5SY C3  C2  SING N N 18 
5SY C3  C4  SING N N 19 
5SY CC  CD  SING N N 20 
5SY C1  C2  SING N N 21 
5SY C1  O5  SING N N 22 
5SY CD  CG  DOUB Y N 23 
5SY CI  CH  DOUB Y N 24 
5SY C5  C4  SING N N 25 
5SY C5  O5  SING N N 26 
5SY C5  C6  SING N N 27 
5SY C4  O4  SING N N 28 
5SY CG  CH  SING Y N 29 
5SY O6  C6  SING N N 30 
5SY C4  H1  SING N N 31 
5SY C5  H2  SING N N 32 
5SY C6  H3  SING N N 33 
5SY C6  H4  SING N N 34 
5SY O6  H5  SING N N 35 
5SY O4  H6  SING N N 36 
5SY C3  H7  SING N N 37 
5SY C2  H8  SING N N 38 
5SY C1  H9  SING N N 39 
5SY C   H10 SING N N 40 
5SY C   H11 SING N N 41 
5SY C   H12 SING N N 42 
5SY CAM H13 SING N N 43 
5SY CAM H14 SING N N 44 
5SY CAM H15 SING N N 45 
5SY CA  H16 SING N N 46 
5SY CA  H17 SING N N 47 
5SY CC  H18 SING N N 48 
5SY CG  H19 SING N N 49 
5SY CH  H20 SING N N 50 
5SY CI  H21 SING N N 51 
5SY CJ  H22 SING N N 52 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
5SY InChI            InChI                1.03  "InChI=1S/C19H22O9/c1-10(21)26-17-16(15(22)14(8-20)28-19(17)24-2)25-9-12-7-11-5-3-4-6-13(11)27-18(12)23/h3-7,14-17,19-20,22H,8-9H2,1-2H3/t14-,15+,16+,17-,19+/m1/s1" 
5SY InChIKey         InChI                1.03  CHNUXPKWFBMLRQ-RDHIYWLCSA-N                                                                                                                                          
5SY SMILES_CANONICAL CACTVS               3.385 "CO[C@H]1O[C@H](CO)[C@H](O)[C@H](OCC2=Cc3ccccc3OC2=O)[C@H]1OC(C)=O"                                                                                                  
5SY SMILES           CACTVS               3.385 "CO[CH]1O[CH](CO)[CH](O)[CH](OCC2=Cc3ccccc3OC2=O)[CH]1OC(C)=O"                                                                                                       
5SY SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "CC(=O)O[C@@H]1[C@H]([C@H]([C@H](O[C@@H]1OC)CO)O)OCC2=Cc3ccccc3OC2=O"                                                                                                
5SY SMILES           "OpenEye OEToolkits" 2.0.4 "CC(=O)OC1C(C(C(OC1OC)CO)O)OCC2=Cc3ccccc3OC2=O"                                                                                                                      
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
5SY "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "[(2~{S},3~{R},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-2-methoxy-5-oxidanyl-4-[(2-oxidanylidenechromen-3-yl)methoxy]oxan-3-yl] ethanoate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
5SY "Create component" 2015-11-25 RCSB 
5SY "Initial release"  2016-10-05 RCSB 
# 
