data_DXY
# 
_chem_comp.id                                    DXY 
_chem_comp.name                                  "N-({4-[(1S)-4-(2,4-diamino-6-oxo-1,6-dihydropyrimidin-5-yl)-1-(methylsulfanyl)butyl]phenyl}carbonyl)-L-glutamic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H27 N5 O6 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2008-11-20 
_chem_comp.pdbx_modified_date                    2013-07-26 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        477.534 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     DXY 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3F4P 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
DXY OE1  OE1  O 0 1 N N N 0.158  72.798 89.676  8.065   -3.380 -0.932 OE1  DXY 1  
DXY CD   CD   C 0 1 N N N 1.137  72.207 89.118  7.938   -2.061 -1.146 CD   DXY 2  
DXY OE2  OE2  O 0 1 N N N 1.481  72.363 87.917  8.548   -1.533 -2.047 OE2  DXY 3  
DXY CG   CG   C 0 1 N N N 2.014  71.203 89.956  7.036   -1.237 -0.263 CG   DXY 4  
DXY CB   CB   C 0 1 N N N 3.064  71.940 90.822  7.073   0.223  -0.718 CB   DXY 5  
DXY CA   CA   C 0 1 N N S 3.676  71.116 91.985  6.157   1.059  0.178  CA   DXY 6  
DXY C    C    C 0 1 N N N 3.821  72.066 93.176  6.286   2.515  -0.190 C    DXY 7  
DXY OXT  OXT  O 0 1 N N N 2.963  72.044 94.070  7.477   3.127  -0.098 OXT  DXY 8  
DXY O    O    O 0 1 N N N 4.790  72.846 93.142  5.317   3.131  -0.568 O    DXY 9  
DXY N    N    N 0 1 N N N 2.924  69.883 92.304  4.768   0.630  -0.006 N    DXY 10 
DXY CAY  CAY  C 0 1 N N N 3.549  68.709 92.429  3.866   0.825  0.976  CAY  DXY 11 
DXY OAF  OAF  O 0 1 N N N 4.754  68.577 92.238  4.205   1.357  2.015  OAF  DXY 12 
DXY CBB  CBB  C 0 1 Y N N 2.640  67.546 92.712  2.465   0.392  0.789  CBB  DXY 13 
DXY CAK  CAK  C 0 1 Y N N 3.009  66.210 92.870  2.074   -0.225 -0.400 CAK  DXY 14 
DXY CAM  CAM  C 0 1 Y N N 2.064  65.215 93.121  0.765   -0.627 -0.568 CAM  DXY 15 
DXY CAJ  CAJ  C 0 1 Y N N 1.328  67.873 92.837  1.528   0.593  1.804  CAJ  DXY 16 
DXY CAL  CAL  C 0 1 Y N N 0.389  66.897 93.084  0.222   0.186  1.624  CAL  DXY 17 
DXY CBC  CBC  C 0 1 Y N N 0.721  65.559 93.234  -0.160  -0.420 0.440  CBC  DXY 18 
DXY CBG  CBG  C 0 1 N N S -0.508 64.631 93.482  -1.588  -0.861 0.250  CBG  DXY 19 
DXY SAV  SAV  S 0 1 N N N -0.754 63.438 92.095  -2.022  -2.070 1.531  SAV  DXY 20 
DXY CAA  CAA  C 0 1 N N N 0.803  63.283 91.215  -0.965  -3.489 1.129  CAA  DXY 21 
DXY CAQ  CAQ  C 0 1 N N N -0.646 63.985 94.888  -2.515  0.351  0.358  CAQ  DXY 22 
DXY CAN  CAN  C 0 1 N N N -0.351 64.932 96.042  -3.947  -0.071 0.024  CAN  DXY 23 
DXY CAP  CAP  C 0 1 N N N -1.252 64.875 97.324  -4.852  1.163  0.006  CAP  DXY 24 
DXY CBD  CBD  C 0 1 N N N -0.436 65.582 98.377  -6.262  0.747  -0.323 CBD  DXY 25 
DXY CBE  CBE  C 0 1 N N N 0.341  64.882 99.291  -6.669  0.595  -1.653 CBE  DXY 26 
DXY OAG  OAG  O 0 1 N N N 0.358  63.656 99.336  -5.886  0.797  -2.568 OAG  DXY 27 
DXY NAU  NAU  N 0 1 N N N 1.097  65.536 100.194 -7.940  0.221  -1.906 NAU  DXY 28 
DXY CAZ  CAZ  C 0 1 N N N 1.144  66.914 100.211 -8.805  -0.002 -0.880 CAZ  DXY 29 
DXY NAB  NAB  N 0 1 N N N 1.920  67.479 101.101 -10.091 -0.380 -1.157 NAB  DXY 30 
DXY NAS  NAS  N 0 1 N N N 0.409  67.613 99.327  -8.430  0.138  0.374  NAS  DXY 31 
DXY CBA  CBA  C 0 1 N N N -0.374 66.995 98.440  -7.181  0.502  0.687  CBA  DXY 32 
DXY NAC  NAC  N 0 1 N N N -1.074 67.734 97.567  -6.810  0.638  2.010  NAC  DXY 33 
DXY H1G  H1G  H 0 1 N N N 1.353  70.626 90.619  6.016   -1.615 -0.334 H1G  DXY 34 
DXY H2G  H2G  H 0 1 N N N 2.549  70.546 89.254  7.378   -1.305 0.770  H2G  DXY 35 
DXY H1B  H1B  H 0 1 N N N 3.889  72.236 90.158  8.093   0.601  -0.648 H1B  DXY 36 
DXY H2B  H2B  H 0 1 N N N 2.533  72.780 91.293  6.731   0.291  -1.751 H2B  DXY 37 
DXY HA   HA   H 0 1 N N N 4.661  70.728 91.687  6.444   0.921  1.221  HA   DXY 38 
DXY HN   HN   H 0 1 N N N 1.933  69.929 92.428  4.498   0.205  -0.836 HN   DXY 39 
DXY HAK  HAK  H 0 1 N N N 4.052  65.939 92.796  2.795   -0.386 -1.188 HAK  DXY 40 
DXY HAM  HAM  H 0 1 N N N 2.373  64.186 93.227  0.462   -1.104 -1.488 HAM  DXY 41 
DXY HAJ  HAJ  H 0 1 N N N 1.020  68.904 92.742  1.825   1.065  2.729  HAJ  DXY 42 
DXY HAL  HAL  H 0 1 N N N -0.649 67.185 93.164  -0.503  0.340  2.409  HAL  DXY 43 
DXY HBG  HBG  H 0 1 N N N -1.356 65.331 93.490  -1.699  -1.318 -0.733 HBG  DXY 44 
DXY H1AA H1AA H 0 0 N N N 0.611  63.251 90.132  -1.220  -4.327 1.777  H1AA DXY 45 
DXY H2AA H2AA H 0 0 N N N 1.444  64.146 91.449  -1.120  -3.774 0.088  H2AA DXY 46 
DXY H3AA H3AA H 0 0 N N N 1.308  62.356 91.525  0.080   -3.217 1.279  H3AA DXY 47 
DXY H1AQ H1AQ H 0 0 N N N -1.682 63.631 94.997  -2.480  0.746  1.373  H1AQ DXY 48 
DXY H2AQ H2AQ H 0 0 N N N 0.098  63.176 94.941  -2.190  1.120  -0.343 H2AQ DXY 49 
DXY H1AN H1AN H 0 0 N N N 0.674  64.708 96.373  -3.966  -0.549 -0.956 H1AN DXY 50 
DXY H2AN H2AN H 0 0 N N N -0.540 65.932 95.624  -4.304  -0.773 0.777  H2AN DXY 51 
DXY H1AP H1AP H 0 0 N N N -2.215 65.380 97.159  -4.833  1.641  0.985  H1AP DXY 52 
DXY H2AP H2AP H 0 0 N N N -1.509 63.845 97.612  -4.494  1.864  -0.748 H2AP DXY 53 
DXY HNAU HNAU H 0 0 N N N 1.631  65.016 100.860 -8.238  0.111  -2.823 HNAU DXY 54 
DXY H1AB H1AB H 0 0 N N N 1.868  68.474 101.010 -10.378 -0.487 -2.077 H1AB DXY 55 
DXY H2AB H2AB H 0 0 N N N 2.480  66.990 101.770 -10.716 -0.542 -0.433 H2AB DXY 56 
DXY H1AC H1AC H 0 0 N N N -1.248 68.637 97.959  -5.905  0.905  2.234  H1AC DXY 57 
DXY H2AC H2AC H 0 0 N N N -0.551 67.833 96.720  -7.453  0.466  2.714  H2AC DXY 58 
DXY HOE1 HOE1 H 0 0 N N N -0.267 73.370 89.048  8.655   -3.866 -1.524 HOE1 DXY 59 
DXY HOXT HOXT H 0 0 N N N 3.162  72.710 94.717  7.510   4.062  -0.345 HOXT DXY 60 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
DXY OE2 CD   DOUB N N 1  
DXY CD  OE1  SING N N 2  
DXY CD  CG   SING N N 3  
DXY CG  CB   SING N N 4  
DXY CB  CA   SING N N 5  
DXY CAA SAV  SING N N 6  
DXY CA  N    SING N N 7  
DXY CA  C    SING N N 8  
DXY SAV CBG  SING N N 9  
DXY OAF CAY  DOUB N N 10 
DXY N   CAY  SING N N 11 
DXY CAY CBB  SING N N 12 
DXY CBB CAJ  DOUB Y N 13 
DXY CBB CAK  SING Y N 14 
DXY CAJ CAL  SING Y N 15 
DXY CAK CAM  DOUB Y N 16 
DXY CAL CBC  DOUB Y N 17 
DXY CAM CBC  SING Y N 18 
DXY O   C    DOUB N N 19 
DXY C   OXT  SING N N 20 
DXY CBC CBG  SING N N 21 
DXY CBG CAQ  SING N N 22 
DXY CAQ CAN  SING N N 23 
DXY CAN CAP  SING N N 24 
DXY CAP CBD  SING N N 25 
DXY NAC CBA  SING N N 26 
DXY CBD CBA  DOUB N N 27 
DXY CBD CBE  SING N N 28 
DXY CBA NAS  SING N N 29 
DXY CBE OAG  DOUB N N 30 
DXY CBE NAU  SING N N 31 
DXY NAS CAZ  DOUB N N 32 
DXY NAU CAZ  SING N N 33 
DXY CAZ NAB  SING N N 34 
DXY CG  H1G  SING N N 35 
DXY CG  H2G  SING N N 36 
DXY CB  H1B  SING N N 37 
DXY CB  H2B  SING N N 38 
DXY CA  HA   SING N N 39 
DXY N   HN   SING N N 40 
DXY CAK HAK  SING N N 41 
DXY CAM HAM  SING N N 42 
DXY CAJ HAJ  SING N N 43 
DXY CAL HAL  SING N N 44 
DXY CBG HBG  SING N N 45 
DXY CAA H1AA SING N N 46 
DXY CAA H2AA SING N N 47 
DXY CAA H3AA SING N N 48 
DXY CAQ H1AQ SING N N 49 
DXY CAQ H2AQ SING N N 50 
DXY CAN H1AN SING N N 51 
DXY CAN H2AN SING N N 52 
DXY CAP H1AP SING N N 53 
DXY CAP H2AP SING N N 54 
DXY NAU HNAU SING N N 55 
DXY NAB H1AB SING N N 56 
DXY NAB H2AB SING N N 57 
DXY NAC H1AC SING N N 58 
DXY NAC H2AC SING N N 59 
DXY OE1 HOE1 SING N N 60 
DXY OXT HOXT SING N N 61 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
DXY SMILES           ACDLabs              10.04 "O=C1C(=C(N=C(N)N1)N)CCCC(SC)c2ccc(C(=O)NC(C(=O)O)CCC(=O)O)cc2" 
DXY SMILES_CANONICAL CACTVS               3.341 "CS[C@@H](CCCC1=C(N)N=C(N)NC1=O)c2ccc(cc2)C(=O)N[C@@H](CCC(O)=O)C(O)=O" 
DXY SMILES           CACTVS               3.341 "CS[CH](CCCC1=C(N)N=C(N)NC1=O)c2ccc(cc2)C(=O)N[CH](CCC(O)=O)C(O)=O" 
DXY SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CS[C@@H](CCCC1=C(N=C(NC1=O)N)N)c2ccc(cc2)C(=O)N[C@@H](CCC(=O)O)C(=O)O" 
DXY SMILES           "OpenEye OEToolkits" 1.5.0 "CSC(CCCC1=C(N=C(NC1=O)N)N)c2ccc(cc2)C(=O)NC(CCC(=O)O)C(=O)O" 
DXY InChI            InChI                1.03  
"InChI=1S/C21H27N5O6S/c1-33-15(4-2-3-13-17(22)25-21(23)26-19(13)30)11-5-7-12(8-6-11)18(29)24-14(20(31)32)9-10-16(27)28/h5-8,14-15H,2-4,9-10H2,1H3,(H,24,29)(H,27,28)(H,31,32)(H5,22,23,25,26,30)/t14-,15-/m0/s1" 
DXY InChIKey         InChI                1.03  GEZLAVXTPLTVRU-GJZGRUSLSA-N 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
DXY "SYSTEMATIC NAME" ACDLabs              10.04 "N-({4-[(1S)-4-(2,4-diamino-6-oxo-1,6-dihydropyrimidin-5-yl)-1-(methylsulfanyl)butyl]phenyl}carbonyl)-L-glutamic acid"   
DXY "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S)-2-[[4-[(1S)-4-(2,4-diamino-6-oxo-1H-pyrimidin-5-yl)-1-methylsulfanyl-butyl]phenyl]carbonylamino]pentanedioic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
DXY "Create component"     2008-11-20 RCSB 
DXY "Modify aromatic_flag" 2011-06-04 RCSB 
DXY "Modify descriptor"    2011-06-04 RCSB 
DXY "Initial release"      2013-07-31 RCSB 
# 
