data_LXY
#

_chem_comp.id                                   LXY
_chem_comp.name                                 "(4R,5S)-4-fluoro-1-[(4-fluorophenyl)sulfonyl]-5-methyl-N-({5-(trifluoromethyl)-2-[2-(trifluoromethyl)pyrimidin-5-yl]pyridin-4-yl}methyl)-L-prolinamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C24 H19 F8 N5 O3 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-04-13
_chem_comp.pdbx_modified_date                   2021-02-12
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       609.492
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    LXY
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6WJ5
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
LXY  C1    C1   C  0  1  N  N  N  157.905  141.221  180.360   6.598   0.594  -0.818  C1    LXY   1  
LXY  C13   C2   C  0  1  Y  N  N  159.864  141.820  184.649   3.681  -2.666  -0.382  C13   LXY   2  
LXY  C14   C3   C  0  1  Y  N  N  161.135  141.891  184.071   4.759  -3.505  -0.175  C14   LXY   3  
LXY  C15   C4   C  0  1  Y  N  N  162.178  142.517  184.762   4.596  -4.677   0.540  C15   LXY   4  
LXY  C16   C5   C  0  1  Y  N  N  161.947  143.059  186.020   3.351  -5.010   1.048  C16   LXY   5  
LXY  C17   C6   C  0  1  Y  N  N  160.689  142.990  186.598   2.272  -4.168   0.839  C17   LXY   6  
LXY  C18   C7   C  0  1  Y  N  N  159.644  142.364  185.917   2.438  -2.997   0.125  C18   LXY   7  
LXY  C2    C8   C  0  1  N  N  S  158.588  142.039  181.445   5.643   0.265   0.331  C2    LXY   8  
LXY  C20   C9   C  0  1  N  N  N  155.593  142.706  182.512   2.327   1.408  -0.603  C20   LXY   9  
LXY  C23   C10  C  0  1  N  N  N  153.894  141.001  181.833   0.054   2.062  -1.191  C23   LXY  10  
LXY  C24   C11  C  0  1  Y  N  N  153.367  139.766  182.529  -1.270   2.260  -0.499  C24   LXY  11  
LXY  C25   C12  C  0  1  Y  N  N  153.870  139.418  183.792  -2.250   1.284  -0.553  C25   LXY  12  
LXY  C26   C13  C  0  1  Y  N  N  153.397  138.293  184.468  -3.461   1.504   0.098  C26   LXY  13  
LXY  C28   C14  C  0  1  Y  N  N  151.934  137.869  182.725  -2.757   3.576   0.834  C28   LXY  14  
LXY  C29   C15  C  0  1  Y  N  N  152.334  138.985  181.991  -1.532   3.424   0.210  C29   LXY  15  
LXY  C30   C16  C  0  1  N  N  N  151.661  139.278  180.679  -0.492   4.510   0.301  C30   LXY  16  
LXY  C34   C17  C  0  1  Y  N  N  153.887  137.939  185.807  -4.521   0.467   0.051  C34   LXY  17  
LXY  C35   C18  C  0  1  Y  N  N  155.145  138.298  186.268  -5.745   0.662   0.695  C35   LXY  18  
LXY  C37   C19  C  0  1  Y  N  N  154.784  137.414  188.345  -6.434  -1.405  -0.035  C37   LXY  19  
LXY  C39   C20  C  0  1  Y  N  N  153.137  137.254  186.749  -4.325  -0.729  -0.645  C39   LXY  20  
LXY  C4    C21  C  0  1  N  N  R  158.399  143.528  181.205   5.541   1.470   1.290  C4    LXY  21  
LXY  C40   C22  C  0  1  N  N  N  155.282  137.136  189.736  -7.510  -2.458  -0.083  C40   LXY  22  
LXY  C6    C23  C  0  1  N  N  N  157.724  144.078  182.448   4.247   2.183   0.814  C6    LXY  23  
LXY  C7    C24  C  0  1  N  N  S  157.007  142.881  183.062   3.361   0.979   0.406  C7    LXY  24  
LXY  F19   F1   F  0  1  N  N  N  162.951  143.624  186.704   3.191  -6.155   1.746  F19   LXY  25  
LXY  F31   F2   F  0  1  N  N  N  150.406  138.752  180.588  -0.992   5.571   1.064  F31   LXY  26  
LXY  F32   F3   F  0  1  N  N  N  151.508  140.607  180.427   0.662   4.002   0.908  F32   LXY  27  
LXY  F33   F4   F  0  1  N  N  N  152.347  138.769  179.621  -0.181   4.966  -0.985  F33   LXY  28  
LXY  F41   F5   F  0  1  N  N  N  155.813  135.888  189.860  -8.114  -2.451  -1.346  F41   LXY  29  
LXY  F42   F6   F  0  1  N  N  N  156.260  137.998  190.139  -6.944  -3.715   0.156  F42   LXY  30  
LXY  F43   F7   F  0  1  N  N  N  154.304  137.224  190.682  -8.473  -2.186   0.895  F43   LXY  31  
LXY  F44   F8   F  0  1  N  N  N  159.606  144.129  181.052   5.410   1.039   2.614  F44   LXY  32  
LXY  N22   N1   N  0  1  N  N  N  155.224  141.397  182.274   1.060   1.645  -0.210  N22   LXY  33  
LXY  N27   N2   N  0  1  Y  N  N  152.434  137.510  183.934  -3.674   2.633   0.762  N27   LXY  34  
LXY  N36   N3   N  0  1  Y  N  N  155.622  138.053  187.506  -6.662  -0.288   0.628  N36   LXY  35  
LXY  N38   N4   N  0  1  Y  N  N  153.549  136.979  188.012  -5.295  -1.626  -0.662  N38   LXY  36  
LXY  N9    N5   N  0  1  N  N  N  157.879  141.741  182.716   4.295   0.011  -0.196  N9    LXY  37  
LXY  O11   O1   O  0  1  N  N  N  157.629  140.506  184.930   5.032  -1.357  -2.114  O11   LXY  38  
LXY  O12   O2   O  0  1  N  N  N  159.310  139.694  183.262   2.611  -0.823  -1.796  O12   LXY  39  
LXY  O21   O3   O  0  1  N  N  N  154.836  143.663  182.357   2.635   1.539  -1.769  O21   LXY  40  
LXY  S10   S1   S  0  1  N  N  N  158.617  140.791  183.909   3.892  -1.168  -1.287  S10   LXY  41  
LXY  H11   H1   H  0  1  N  N  N  158.057  140.150  180.557   6.244   1.482  -1.342  H11   LXY  42  
LXY  H12   H2   H  0  1  N  N  N  156.828  141.444  180.356   7.595   0.781  -0.420  H12   LXY  43  
LXY  H13   H3   H  0  1  N  N  N  158.336  141.478  179.381   6.636  -0.246  -1.511  H13   LXY  44  
LXY  H141  H4   H  0  0  N  N  N  161.311  141.464  183.095   5.729  -3.246  -0.572  H141  LXY  45  
LXY  H151  H5   H  0  0  N  N  N  163.161  142.579  184.318   5.438  -5.333   0.701  H151  LXY  46  
LXY  H171  H6   H  0  0  N  N  N  160.518  143.420  187.574   1.301  -4.426   1.235  H171  LXY  47  
LXY  H181  H7   H  0  0  N  N  N  158.666  142.300  186.370   1.596  -2.340  -0.038  H181  LXY  48  
LXY  H3    H8   H  0  1  N  N  N  159.656  141.785  181.513   6.002  -0.611   0.871  H3    LXY  49  
LXY  H232  H9   H  0  0  N  N  N  153.201  141.833  182.029  -0.047   1.293  -1.956  H232  LXY  50  
LXY  H231  H10  H  0  0  N  N  N  153.931  140.801  180.752   0.366   2.998  -1.655  H231  LXY  51  
LXY  H251  H11  H  0  0  N  N  N  154.634  140.030  184.247  -2.077   0.364  -1.093  H251  LXY  52  
LXY  H281  H12  H  0  0  N  N  N  151.166  137.241  182.298  -2.966   4.482   1.383  H281  LXY  53  
LXY  H351  H13  H  0  0  N  N  N  155.796  138.816  185.579  -5.939   1.573   1.241  H351  LXY  54  
LXY  H391  H14  H  0  0  N  N  N  152.154  136.915  186.457  -3.395  -0.917  -1.161  H391  LXY  55  
LXY  H5    H15  H  0  1  N  N  N  157.747  143.681  180.332   6.405   2.125   1.179  H5    LXY  56  
LXY  H62   H16  H  0  1  N  N  N  158.470  144.484  183.147   3.790   2.746   1.628  H62   LXY  57  
LXY  H61   H17  H  0  1  N  N  N  157.004  144.866  182.182   4.448   2.828  -0.041  H61   LXY  58  
LXY  H8    H18  H  0  1  N  N  N  156.961  143.003  184.154   2.878   0.549   1.283  H8    LXY  59  
LXY  H221  H19  H  0  0  N  N  N  155.908  140.681  182.412   0.813   1.540   0.722  H221  LXY  60  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
LXY  F33  C30   SING  N  N   1  
LXY  C1   C2    SING  N  N   2  
LXY  F32  C30   SING  N  N   3  
LXY  F31  C30   SING  N  N   4  
LXY  C30  C29   SING  N  N   5  
LXY  F44  C4    SING  N  N   6  
LXY  C4   C2    SING  N  N   7  
LXY  C4   C6    SING  N  N   8  
LXY  C2   N9    SING  N  N   9  
LXY  C23  N22   SING  N  N  10  
LXY  C23  C24   SING  N  N  11  
LXY  C29  C24   DOUB  Y  N  12  
LXY  C29  C28   SING  Y  N  13  
LXY  N22  C20   SING  N  N  14  
LXY  O21  C20   DOUB  N  N  15  
LXY  C6   C7    SING  N  N  16  
LXY  C20  C7    SING  N  N  17  
LXY  C24  C25   SING  Y  N  18  
LXY  N9   C7    SING  N  N  19  
LXY  N9   S10   SING  N  N  20  
LXY  C28  N27   DOUB  Y  N  21  
LXY  O12  S10   DOUB  N  N  22  
LXY  C25  C26   DOUB  Y  N  23  
LXY  S10  C13   SING  N  N  24  
LXY  S10  O11   DOUB  N  N  25  
LXY  N27  C26   SING  Y  N  26  
LXY  C14  C13   DOUB  Y  N  27  
LXY  C14  C15   SING  Y  N  28  
LXY  C26  C34   SING  N  N  29  
LXY  C13  C18   SING  Y  N  30  
LXY  C15  C16   DOUB  Y  N  31  
LXY  C34  C35   DOUB  Y  N  32  
LXY  C34  C39   SING  Y  N  33  
LXY  C18  C17   DOUB  Y  N  34  
LXY  C16  C17   SING  Y  N  35  
LXY  C16  F19   SING  N  N  36  
LXY  C35  N36   SING  Y  N  37  
LXY  C39  N38   DOUB  Y  N  38  
LXY  N36  C37   DOUB  Y  N  39  
LXY  N38  C37   SING  Y  N  40  
LXY  C37  C40   SING  N  N  41  
LXY  C40  F41   SING  N  N  42  
LXY  C40  F42   SING  N  N  43  
LXY  C40  F43   SING  N  N  44  
LXY  C1   H11   SING  N  N  45  
LXY  C1   H12   SING  N  N  46  
LXY  C1   H13   SING  N  N  47  
LXY  C14  H141  SING  N  N  48  
LXY  C15  H151  SING  N  N  49  
LXY  C17  H171  SING  N  N  50  
LXY  C18  H181  SING  N  N  51  
LXY  C2   H3    SING  N  N  52  
LXY  C23  H232  SING  N  N  53  
LXY  C23  H231  SING  N  N  54  
LXY  C25  H251  SING  N  N  55  
LXY  C28  H281  SING  N  N  56  
LXY  C35  H351  SING  N  N  57  
LXY  C39  H391  SING  N  N  58  
LXY  C4   H5    SING  N  N  59  
LXY  C6   H62   SING  N  N  60  
LXY  C6   H61   SING  N  N  61  
LXY  C7   H8    SING  N  N  62  
LXY  N22  H221  SING  N  N  63  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
LXY  SMILES            ACDLabs               12.01  "CC3N(C(C(NCc2cc(c1cnc(C(F)(F)F)nc1)ncc2C(F)(F)F)=O)CC3F)S(c4ccc(cc4)F)(=O)=O"  
LXY  InChI             InChI                 1.03   "InChI=1S/C24H19F8N5O3S/c1-12-18(26)7-20(37(12)41(39,40)16-4-2-15(25)3-5-16)21(38)34-8-13-6-19(33-11-17(13)23(27,28)29)14-9-35-22(36-10-14)24(30,31)32/h2-6,9-12,18,20H,7-8H2,1H3,(H,34,38)/t12-,18+,20-/m0/s1"  
LXY  InChIKey          InChI                 1.03   RGXNECXVRZKGGH-UOXRKKOCSA-N  
LXY  SMILES_CANONICAL  CACTVS                3.385  "C[C@H]1[C@H](F)C[C@H](N1[S](=O)(=O)c2ccc(F)cc2)C(=O)NCc3cc(ncc3C(F)(F)F)c4cnc(nc4)C(F)(F)F"  
LXY  SMILES            CACTVS                3.385  "C[CH]1[CH](F)C[CH](N1[S](=O)(=O)c2ccc(F)cc2)C(=O)NCc3cc(ncc3C(F)(F)F)c4cnc(nc4)C(F)(F)F"  
LXY  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C[C@H]1[C@@H](C[C@H](N1S(=O)(=O)c2ccc(cc2)F)C(=O)NCc3cc(ncc3C(F)(F)F)c4cnc(nc4)C(F)(F)F)F"  
LXY  SMILES            "OpenEye OEToolkits"  2.0.7  "CC1C(CC(N1S(=O)(=O)c2ccc(cc2)F)C(=O)NCc3cc(ncc3C(F)(F)F)c4cnc(nc4)C(F)(F)F)F"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
LXY  "SYSTEMATIC NAME"  ACDLabs               12.01  "(4R,5S)-4-fluoro-1-[(4-fluorophenyl)sulfonyl]-5-methyl-N-({5-(trifluoromethyl)-2-[2-(trifluoromethyl)pyrimidin-5-yl]pyridin-4-yl}methyl)-L-prolinamide"  
LXY  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(2~{S},4~{R},5~{S})-4-fluoranyl-1-(4-fluorophenyl)sulfonyl-5-methyl-~{N}-[[5-(trifluoromethyl)-2-[2-(trifluoromethyl)pyrimidin-5-yl]pyridin-4-yl]methyl]pyrrolidine-2-carboxamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
LXY  "Create component"  2020-04-13  RCSB  
LXY  "Initial release"   2021-02-17  RCSB  
##
