data_4IZ
# 
_chem_comp.id                                    4IZ 
_chem_comp.name                                  "beta-D-galactopyranosyl 1-seleno-beta-D-galactopyranoside" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C12 H22 O10 Se" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-07-12 
_chem_comp.pdbx_modified_date                    2022-07-08 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        405.257 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     4IZ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7RDP 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
4IZ C4  C1  C  0 1 N N R 18.210 -6.922  -0.596 4.062  -0.789 0.201  C4  4IZ 1  
4IZ C5  C2  C  0 1 N N R 19.753 -6.730  -0.837 2.749  -1.508 0.522  C5  4IZ 2  
4IZ C6  C3  C  0 1 N N N 20.344 -5.602  0.019  2.923  -2.345 1.791  C6  4IZ 3  
4IZ C3  C4  C  0 1 N N S 17.721 -8.092  -1.458 3.864  0.093  -1.035 C3  4IZ 4  
4IZ O2  O1  O  0 1 N N N 18.141 -10.374 -2.035 2.475  1.852  -1.944 O2  4IZ 5  
4IZ C2  C5  C  0 1 N N R 18.518 -9.335  -1.151 2.716  1.073  -0.771 C2  4IZ 6  
4IZ O3  O2  O  0 1 N N N 16.390 -8.350  -1.183 5.064  0.823  -1.298 O3  4IZ 7  
4IZ O4  O3  O  0 1 N N N 17.929 -7.193  0.798  4.445  0.024  1.312  O4  4IZ 8  
4IZ O6  O4  O  0 1 N N N 21.765 -5.518  -0.156 1.736  -3.106 2.026  O6  4IZ 9  
4IZ O5  O5  O  0 1 N N N 20.442 -7.973  -0.490 1.716  -0.542 0.727  O5  4IZ 10 
4IZ C1  C6  C  0 1 N N S 20.025 -9.070  -1.295 1.454  0.283  -0.413 C1  4IZ 11 
4IZ SE1 SE1 SE 0 0 N N N 21.045 -10.639 -0.615 -0.001 1.529  0.001  SE1 4IZ 12 
4IZ CAN C7  C  0 1 N N S 22.805 -9.990  -0.807 -1.455 0.282  0.414  CAN 4IZ 13 
4IZ OAO O6  O  0 1 N N N 23.444 -10.676 -1.926 -1.716 -0.539 -0.726 OAO 4IZ 14 
4IZ CAP C8  C  0 1 N N R 24.799 -10.217 -2.165 -2.748 -1.507 -0.524 CAP 4IZ 15 
4IZ CAV C9  C  0 1 N N N 25.285 -11.112 -3.313 -2.920 -2.343 -1.794 CAV 4IZ 16 
4IZ OAW O7  O  0 1 N N N 24.457 -10.733 -4.424 -1.732 -3.101 -2.030 OAW 4IZ 17 
4IZ CAQ C10 C  0 1 N N R 25.679 -10.442 -0.978 -4.062 -0.790 -0.203 CAQ 4IZ 18 
4IZ OAU O8  O  0 1 N N N 25.804 -11.859 -0.637 -4.446 0.024  -1.312 OAU 4IZ 19 
4IZ CAR C11 C  0 1 N N S 25.028 -9.743  0.210  -3.865 0.090  1.035  CAR 4IZ 20 
4IZ OAT O9  O  0 1 N N N 25.832 -10.048 1.316  -5.065 0.819  1.299  OAT 4IZ 21 
4IZ CAM C12 C  0 1 N N R 23.653 -10.247 0.458  -2.717 1.071  0.773  CAM 4IZ 22 
4IZ OAS O10 O  0 1 N N N 23.142 -9.578  1.620  -2.476 1.849  1.947  OAS 4IZ 23 
4IZ H1  H1  H  0 1 N N N 17.692 -6.005  -0.914 4.841  -1.525 0.003  H1  4IZ 24 
4IZ H2  H2  H  0 1 N N N 19.914 -6.495  -1.900 2.478  -2.159 -0.309 H2  4IZ 25 
4IZ H3  H3  H  0 1 N N N 19.887 -4.647  -0.279 3.769  -3.021 1.667  H3  4IZ 26 
4IZ H4  H4  H  0 1 N N N 20.123 -5.800  1.078  3.105  -1.686 2.640  H4  4IZ 27 
4IZ H5  H5  H  0 1 N N N 17.858 -7.831  -2.518 3.622  -0.532 -1.894 H5  4IZ 28 
4IZ H6  H6  H  0 1 N N N 18.645 -11.155 -1.839 1.759  2.495  -1.849 H6  4IZ 29 
4IZ H7  H7  H  0 1 N N N 18.317 -9.635  -0.112 2.982  1.731  0.055  H7  4IZ 30 
4IZ H8  H8  H  0 1 N N N 15.872 -7.576  -1.371 5.008  1.409  -2.066 H8  4IZ 31 
4IZ H9  H9  H  0 1 N N N 18.233 -6.467  1.330  5.270  0.511  1.177  H9  4IZ 32 
4IZ H10 H10 H  0 1 N N N 22.110 -4.815  0.382  1.775  -3.662 2.816  H10 4IZ 33 
4IZ H11 H11 H  0 1 N N N 20.308 -8.956  -2.352 1.167  -0.344 -1.257 H11 4IZ 34 
4IZ H12 H12 H  0 1 N N N 22.719 -8.909  -0.994 -1.167 -0.346 1.256  H12 4IZ 35 
4IZ H13 H13 H  0 1 N N N 24.818 -9.161  -2.471 -2.477 -2.159 0.306  H13 4IZ 36 
4IZ H14 H14 H  0 1 N N N 25.145 -12.175 -3.066 -3.765 -3.020 -1.671 H14 4IZ 37 
4IZ H15 H15 H  0 1 N N N 26.346 -10.923 -3.534 -3.104 -1.682 -2.641 H15 4IZ 38 
4IZ H16 H16 H  0 1 N N N 24.695 -11.247 -5.187 -1.770 -3.655 -2.821 H16 4IZ 39 
4IZ H17 H17 H  0 1 N N N 26.672 -10.005 -1.161 -4.840 -1.528 -0.005 H17 4IZ 40 
4IZ H18 H18 H  0 1 N N N 26.370 -11.954 0.120  -5.272 0.508  -1.178 H18 4IZ 41 
4IZ H19 H19 H  0 1 N N N 25.002 -8.659  0.026  -3.621 -0.536 1.893  H19 4IZ 42 
4IZ H20 H20 H  0 1 N N N 25.472 -9.636  2.093  -5.011 1.399  2.071  H20 4IZ 43 
4IZ H21 H21 H  0 1 N N N 23.692 -11.332 0.637  -2.983 1.729  -0.054 H21 4IZ 44 
4IZ H22 H22 H  0 1 N N N 23.698 -9.769  2.366  -1.757 2.489  1.853  H22 4IZ 45 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
4IZ OAW CAV SING N N 1  
4IZ CAV CAP SING N N 2  
4IZ CAP OAO SING N N 3  
4IZ CAP CAQ SING N N 4  
4IZ O2  C2  SING N N 5  
4IZ OAO CAN SING N N 6  
4IZ C3  O3  SING N N 7  
4IZ C3  C2  SING N N 8  
4IZ C3  C4  SING N N 9  
4IZ C1  C2  SING N N 10 
4IZ C1  SE1 SING N N 11 
4IZ C1  O5  SING N N 12 
4IZ CAQ OAU SING N N 13 
4IZ CAQ CAR SING N N 14 
4IZ C5  C4  SING N N 15 
4IZ C5  O5  SING N N 16 
4IZ C5  C6  SING N N 17 
4IZ CAN SE1 SING N N 18 
4IZ CAN CAM SING N N 19 
4IZ C4  O4  SING N N 20 
4IZ O6  C6  SING N N 21 
4IZ CAR CAM SING N N 22 
4IZ CAR OAT SING N N 23 
4IZ CAM OAS SING N N 24 
4IZ C4  H1  SING N N 25 
4IZ C5  H2  SING N N 26 
4IZ C6  H3  SING N N 27 
4IZ C6  H4  SING N N 28 
4IZ C3  H5  SING N N 29 
4IZ O2  H6  SING N N 30 
4IZ C2  H7  SING N N 31 
4IZ O3  H8  SING N N 32 
4IZ O4  H9  SING N N 33 
4IZ O6  H10 SING N N 34 
4IZ C1  H11 SING N N 35 
4IZ CAN H12 SING N N 36 
4IZ CAP H13 SING N N 37 
4IZ CAV H14 SING N N 38 
4IZ CAV H15 SING N N 39 
4IZ OAW H16 SING N N 40 
4IZ CAQ H17 SING N N 41 
4IZ OAU H18 SING N N 42 
4IZ CAR H19 SING N N 43 
4IZ OAT H20 SING N N 44 
4IZ CAM H21 SING N N 45 
4IZ OAS H22 SING N N 46 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
4IZ SMILES           ACDLabs              12.01 "OC1C(OC(CO)C(O)C1O)[Se]C1OC(CO)C(O)C(O)C1O"                                                                                                  
4IZ InChI            InChI                1.03  "InChI=1S/C12H22O10Se/c13-1-3-5(15)7(17)9(19)11(21-3)23-12-10(20)8(18)6(16)4(2-14)22-12/h3-20H,1-2H2/t3-,4-,5+,6+,7+,8+,9-,10-,11+,12+/m1/s1" 
4IZ InChIKey         InChI                1.03  XCXHDIQHVBWOAM-ZFDCCPEWSA-N                                                                                                                   
4IZ SMILES_CANONICAL CACTVS               3.385 "OC[C@H]1O[C@@H]([Se][C@@H]2O[C@H](CO)[C@H](O)[C@H](O)[C@H]2O)[C@H](O)[C@@H](O)[C@H]1O"                                                       
4IZ SMILES           CACTVS               3.385 "OC[CH]1O[CH]([Se][CH]2O[CH](CO)[CH](O)[CH](O)[CH]2O)[CH](O)[CH](O)[CH]1O"                                                                    
4IZ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@@H]1[C@@H]([C@@H]([C@H]([C@@H](O1)[Se][C@H]2[C@@H]([C@H]([C@H]([C@H](O2)CO)O)O)O)O)O)O)O"                                               
4IZ SMILES           "OpenEye OEToolkits" 2.0.7 "C(C1C(C(C(C(O1)[Se]C2C(C(C(C(O2)CO)O)O)O)O)O)O)O"                                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
4IZ "SYSTEMATIC NAME" ACDLabs              12.01 "beta-D-galactopyranosyl 1-seleno-beta-D-galactopyranoside"                                                                                                      
4IZ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{R},3~{R},4~{S},5~{R},6~{S})-2-(hydroxymethyl)-6-[(2~{S},3~{R},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]selanyl-oxane-3,4,5-triol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
4IZ "Create component" 2021-07-12 RCSB 
4IZ "Initial release"  2022-07-13 RCSB 
# 
