data_A1L3Z
# 
_chem_comp.id                                    A1L3Z 
_chem_comp.name                                  "(2~{S},3~{S},4~{S})-2-[(1~{S})-1,2-bis(oxidanyl)ethyl]pyrrolidine-3,4-diol" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C6 H13 N O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-08-22 
_chem_comp.pdbx_modified_date                    2024-11-22 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        163.172 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1L3Z 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        9J6N 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1L3Z C4  C1  C 0 1 N N N N N N -12.149 16.576 15.017 -1.660 1.397  -0.776 C4  A1L3Z 1  
A1L3Z C5  C2  C 0 1 N N S N N N -11.648 15.546 16.028 -2.249 0.162  -0.063 C5  A1L3Z 2  
A1L3Z C6  C3  C 0 1 N N S N N N -12.920 14.856 16.550 -1.086 -0.849 0.015  C6  A1L3Z 3  
A1L3Z N1  N1  N 0 1 N N N N N N -13.588 16.232 14.796 -0.197 1.310  -0.531 N1  A1L3Z 4  
A1L3Z C3  C4  C 0 1 N N S N N N -14.090 15.756 16.151 0.108  -0.138 -0.658 C3  A1L3Z 5  
A1L3Z O1  O1  O 0 1 N N N N N N -15.860 15.574 18.489 3.779  0.001  0.120  O1  A1L3Z 6  
A1L3Z C1  C5  C 0 1 N N N N N N -15.947 14.646 17.419 2.542  0.396  -0.477 C1  A1L3Z 7  
A1L3Z C2  C6  C 0 1 N N S N N N -15.467 15.153 16.068 1.410  -0.475 0.071  C2  A1L3Z 8  
A1L3Z O2  O2  O 0 1 N N N N N N -16.400 16.143 15.581 1.251  -0.226 1.469  O2  A1L3Z 9  
A1L3Z O3  O3  O 0 1 N N N N N N -10.772 14.585 15.446 -2.691 0.511  1.250  O3  A1L3Z 10 
A1L3Z O4  O4  O 0 1 N N N N N N -12.890 14.703 17.962 -1.418 -2.043 -0.696 O4  A1L3Z 11 
A1L3Z H1  H1  H 0 1 N N N N N N -11.584 16.501 14.076 -1.869 1.355  -1.845 H1  A1L3Z 12 
A1L3Z H2  H2  H 0 1 N N N N N N -12.053 17.594 15.422 -2.065 2.313  -0.347 H2  A1L3Z 13 
A1L3Z H3  H3  H 0 1 N N N N N N -11.154 16.067 16.861 -3.073 -0.254 -0.643 H3  A1L3Z 14 
A1L3Z H4  H4  H 0 1 N N N N N N -13.029 13.880 16.055 -0.853 -1.079 1.055  H4  A1L3Z 15 
A1L3Z H5  H5  H 0 1 N N N N N N -14.100 17.036 14.494 0.317  1.849  -1.211 H5  A1L3Z 16 
A1L3Z H7  H7  H 0 1 N N N N N N -14.120 16.616 16.837 0.176  -0.421 -1.709 H7  A1L3Z 17 
A1L3Z H8  H8  H 0 1 N N N N N N -16.180 15.169 19.287 4.542  0.512  -0.181 H8  A1L3Z 18 
A1L3Z H9  H9  H 0 1 N N N N N N -17.001 14.349 17.314 2.343  1.441  -0.242 H9  A1L3Z 19 
A1L3Z H10 H10 H 0 1 N N N N N N -15.343 13.766 17.684 2.605  0.271  -1.558 H10 A1L3Z 20 
A1L3Z H11 H11 H 0 1 N N N N N N -15.437 14.304 15.369 1.653  -1.527 -0.085 H11 A1L3Z 21 
A1L3Z H12 H12 H 0 1 N N N N N N -17.269 15.762 15.529 1.034  0.692  1.683  H12 A1L3Z 22 
A1L3Z H13 H13 H 0 1 N N N N N N -10.489 13.969 16.112 -3.392 1.177  1.265  H13 A1L3Z 23 
A1L3Z H14 H14 H 0 1 N N N N N N -13.687 14.275 18.252 -2.189 -2.508 -0.344 H14 A1L3Z 24 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1L3Z N1 C4  SING N N 1  
A1L3Z N1 C3  SING N N 2  
A1L3Z C4 C5  SING N N 3  
A1L3Z O3 C5  SING N N 4  
A1L3Z O2 C2  SING N N 5  
A1L3Z C5 C6  SING N N 6  
A1L3Z C2 C3  SING N N 7  
A1L3Z C2 C1  SING N N 8  
A1L3Z C3 C6  SING N N 9  
A1L3Z C6 O4  SING N N 10 
A1L3Z C1 O1  SING N N 11 
A1L3Z C4 H1  SING N N 12 
A1L3Z C4 H2  SING N N 13 
A1L3Z C5 H3  SING N N 14 
A1L3Z C6 H4  SING N N 15 
A1L3Z N1 H5  SING N N 16 
A1L3Z C3 H7  SING N N 17 
A1L3Z O1 H8  SING N N 18 
A1L3Z C1 H9  SING N N 19 
A1L3Z C1 H10 SING N N 20 
A1L3Z C2 H11 SING N N 21 
A1L3Z O2 H12 SING N N 22 
A1L3Z O3 H13 SING N N 23 
A1L3Z O4 H14 SING N N 24 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1L3Z InChI            InChI                1.06  "InChI=1S/C6H13NO4/c8-2-4(10)5-6(11)3(9)1-7-5/h3-11H,1-2H2/t3-,4+,5-,6+/m0/s1" 
A1L3Z InChIKey         InChI                1.06  RVNSAAIWCWTCTJ-BGPJRJDNSA-N                                                    
A1L3Z SMILES_CANONICAL CACTVS               3.385 "OC[C@@H](O)[C@@H]1NC[C@H](O)[C@H]1O"                                          
A1L3Z SMILES           CACTVS               3.385 "OC[CH](O)[CH]1NC[CH](O)[CH]1O"                                                
A1L3Z SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C1[C@@H]([C@H]([C@@H](N1)[C@@H](CO)O)O)O"                                     
A1L3Z SMILES           "OpenEye OEToolkits" 2.0.7 "C1C(C(C(N1)C(CO)O)O)O"                                                        
# 
_pdbx_chem_comp_identifier.comp_id           A1L3Z 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{S},3~{S},4~{S})-2-[(1~{S})-1,2-bis(oxidanyl)ethyl]pyrrolidine-3,4-diol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1L3Z "Create component" 2024-08-22 PDBJ 
A1L3Z "Initial release"  2024-11-27 RCSB 
# 
